5 Best Ways to Return the Discrete Linear Convolution of Two One-Dimensional Sequences in Python

πŸ’‘ Problem Formulation: Given two one-dimensional sequences (arrays or lists), the task is to compute their discrete linear convolutionβ€”a mathematical operation that essentially combines two sequences to produce a third sequence that represents the amount of overlap between the sequences as one is slid past the other. For example, given sequences [1, 2, 3] and [0, 1, 0.5], the desired output is their convolution, which may look like [0, 1, 2.5, 4, 1.5].

Method 1: Using NumPy’s convolve Function

The NumPy library offers a straightforward and efficient way to compute the discrete linear convolution of two sequences via its convolve() function. This function directly returns the convolution of the two sequences that are passed to it as arguments. NumPy is a highly optimized library for numerical operations and is the standard in Python for such tasks.

Here’s an example:

import numpy as np

# Define the two sequences
seq1 = [1, 2, 3]
seq2 = [0, 1, 0.5]

# Compute the convolution using NumPy
convolution = np.convolve(seq1, seq2, 'full')

# Print the result
print(convolution)

Output:

[0.  1.  2.5  4.  1.5]

This code snippet outputs the linear convolution of the two input sequences by leveraging NumPy’s convolve() function. When executed, it combines the inputs and returns their overlap as the convolution result which captures the effect one sequence has on the other when combined.

Method 2: Using SciPy’s convolve Function

The SciPy library extends the functionality of NumPy and provides a more comprehensive set of tools for scientific computing, which includes the convolve() function in its signal processing module. This offers additional options for boundary effects and is designed specifically for signal processing tasks.

Here’s an example:

from scipy import signal

# Define the two sequences
seq1 = [1, 2, 3]
seq2 = [0, 1, 0.5]

# Compute the convolution using SciPy
convolution = signal.convolve(seq1, seq2)

# Print the result
print(convolution)

Output:

[0.  1.  2.5  4.  1.5]

Similar to NumPy, the SciPy library provides a convolve() method that calculates the discrete linear convolution of two sequences. The output here is identical to the NumPy example, but SciPy offers more options for signal processing, potentially making it a more versatile choice under certain conditions.

Method 3: Implementing Convolution Using Python Loops

Without external libraries, the discrete linear convolution can also be computed manually using Python loops. This might be a worthwhile exercise for educational purposes or in environments where external libraries are unavailable. However, this method is computationally less efficient than using the optimized functions from NumPy or SciPy.

Here’s an example:

def convolve_sequences(seq1, seq2):
  result = [0]*(len(seq1)+len(seq2)-1)
  for i in range(len(seq1)):
    for j in range(len(seq2)):
      result[i+j] += seq1[i]*seq2[j]
  return result

# Define the two sequences
seq1 = [1, 2, 3]
seq2 = [0, 1, 0.5]

# Compute the convolution
convolution = convolve_sequences(seq1, seq2)

# Print the result
print(convolution)

Output:

[0.0, 1.0, 2.5, 4.0, 1.5]

This snippet defines a function convolve_sequences() that implements the convolution algorithm with nested loops, iterating over the elements of both input sequences and accumulating the products in the correct positions of the result array. The resulting array is then printed out.

Method 4: Using the Fourier Transform for Convolution

The convolution theorem states that the Fourier transform of a convolution is the pointwise product of the Fourier transforms of the original functions, followed by an inverse Fourier transform. Computations using the Fast Fourier Transform (FFT) can be more efficient for large data sets.

Here’s an example:

import numpy as np

# Define the two sequences
seq1 = [1, 2, 3]
seq2 = [0, 1, 0.5]

# Compute the Fourier transforms
fft_seq1 = np.fft.fft(seq1, n=len(seq1)+len(seq2)-1)
fft_seq2 = np.fft.fft(seq2, n=len(seq1)+len(seq2)-1)

# Element-wise multiplication of the Fourier transformed sequences
product = fft_seq1 * fft_seq2

# Inverse Fourier transform to get the convolution
convolution = np.fft.ifft(product)

# Print the result
print(np.real(convolution))

Output:

[0.  1.  2.5  4.  1.5]

By applying Fourier transforms to the sequences, performing an element-wise multiplication, and then applying the inverse Fourier transform, we obtain the convolution of the two sequences. The output is cast to real numbers to get rid of any imaginary parts due to floating-point arithmetic. This FFT-based method is particularly effective for large sequences.

Bonus One-Liner Method 5: Using list comprehension

For those who prefer a concise, one-line solution without the need for additional libraries, list comprehension can be used to create a simple convolution function. This method is succinct but not recommended for handling large data sets due to its lack of optimization.

Here’s an example:

# Define the two sequences
seq1 = [1, 2, 3]
seq2 = [0, 1, 0.5]

# Compute the convolution using list comprehension
convolution = [sum(seq1[i]*seq2[j-i] for i in range(len(seq1)) if 0 <= j-i < len(seq2)) for j in range(len(seq1)+len(seq2)-1)]

# Print the result
print(convolution)

Output:

[0, 1, 2.5, 4, 1.5]

This one-liner uses list comprehension to perform the convolution of the two sequences. It iterates over the range of the sum of lengths of the two sequences minus one, for each index calculating a sequence of products, subject to an index check, and summing them. The line of code may be difficult to read but achieves the desired result.

Summary/Discussion

  • Method 1: NumPy convolve. Highly efficient and concise. Requires NumPy but widely used in data science.
  • Method 2: SciPy convolve. Offers additional signal processing features. Like NumPy, requires an external library, which may not always be available.
  • Method 3: Python Loops. Good for learning purposes. Computationally inefficient and not recommended for large data sets.
  • Method 4: Fourier Transform. Efficient for large data sets. Requires understanding Fourier transforms and might introduce slight errors due to floating-point arithmetic.
  • Method 5: List Comprehension. Concise, but computationally inefficient and potentially hard to read and debug. Does not require external libraries.